Spine target record

JavaScript Menu Courtesy of Milonic.com

TR1 target record
[nucleotide sequence] [protein sequence] [ncbi blast] [add construct]

Target status

Status: X-Ray structure
Member of: PSI-1, PSI-2, MEGA, DrugBank-100-pctid, DrugBank-90-pctid, DrugBank-80-pctid projects.
Deposited PDB structure: 1F38
Structure gallery entries: 1F38

Target searches

Target annotation

Target comments: no comments
Annotations: Uniprot: Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]

CATH: 3.40.50.150 Vaccinia Virus protein VP39

CRSH id: 3431

Competition (top hits reported)

calculating... please wait

Target statistics

Target length: 192 aa
pI: 4.88
MW: 20.7 kD
Source organism: Methanothermobacter thermautotrophicus
Swiss-prot/trEMBL: CBIT_METTH

Target bioinformatics

Pxs: 0.268
disorder prediction: ( report )
prof predictions: ( report )
Zn binding prediction: ( report )

Domain families

show subsequence

classification type: PFAM
classification id: PF06325
assigned to: na
sequence range: 34-155
competition:
calculating... please wait

classification type: PFAM
classification id: PF03602
assigned to: na
sequence range: 31-95
competition:
calculating... please wait

classification type: PFAM
classification id: PF01170
assigned to: na
sequence range: 25-91
competition:
calculating... please wait

classification type: PFAM
classification id: PF05175
assigned to: na
sequence range: 23-96
competition:
calculating... please wait

classification type: PFAM
classification id: PF09445
assigned to: na
sequence range: 36-98
competition:
calculating... please wait

classification type: PFAM
classification id: PF01135
assigned to: na
sequence range: 34-132
competition:
calculating... please wait

classification type: PFAM
classification id: PF08241
assigned to: na
sequence range: 38-132
competition:
calculating... please wait

classification type: PFAM
classification id: PF02475
assigned to: na
sequence range: 33-140
competition:
calculating... please wait

classification type: PFAM
classification id: PF01209
assigned to: na
sequence range: 32-132
competition:
calculating... please wait

classification type: MEGA
classification id: 3.40.50.150
assigned to: mcsg

sequence range:

19-183,21-159,21-162,21-149,14-157,24-148,20-138,21-149,26-149,25-134,31-150,19-133,28-134,22-138,24-153,28-140,28-137,25-153,28-136,29-149,6-155,28-145,28-137,29-131,29-137,31-136,29-138,30-139,30-159,33-149,31-144,32-156,29-139,33-139,25-133,32-132,25-135,28-178,36-134,28-142,24-135,32-151,29-138,21-98,36-145,28-96,31-144,32-133,29-100,32-135,39-134,28-134,26-177,25-93,25-87,24-91,33-97,32-150,24-79,112-144,35-154,35-153,37-151,29-69