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Content-type: text/html NESG target list
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PSI:biology partners
  Epigenetics project
      target list A
      target list B
      Fab targets
      LID complex
      polycomb complexes

  Mitochondria protein
  partnership (MPP)
      List 1   (cDNA not available)
      List 2   (cDNA available)
      Structural coverage
      Biomedical
      Community nominated


Community Outreach projects
  Enzyme Natural
  Product Discovery

  Baker - de novo design
  Baker - class I
  Baker - class II


Biomedical projects
  HCPIN - Human Cancer Protein
  Interaction Network
      HCPIN T1
      HCPIN T2
      HCPIN T3
      HCPIN T4
  Human ubiquitin
  Start domains

Common views
  all NESG targets
  Metagenomic targets
  Transcription factors

MEGA structural coverage
  2.40.50.140   OB fold
  3.50.50.60     Oxidoreductase
  3.10.20.90     Ubiquitin
  3.30.530.20   Start
  2.120.10.30   Tol-B
  3.40.50.300   P-loop
  3.40.50.720   NADP binding
  3.20.20.70     Aldolase
  3.40.50.150   VP39



NESG reagent genomes
(A)A. thaliana
(Aa)A. aurescens
(Ab)A. baumannii
(Ag)A. gossypii
(Ah)A. hydrophila
(An)A. sp.
(Ap)A. pleuropneumoniae
(As)A. sp.
(At)A. tumefaciens
(B)C. jejuni
(Ba)B. taurus
(Bb)B. burgdorferi
(Bc)B. cereus
(Bd)B. adolescentis
(Be)B. pertussis
(Bf)B. fragilis
(Bh)B. halodurans
(Bi)B. licheniformis
(Bj)B. japonicum
(Bl)B. longum
(Bm)B. dentium
(Bn)B. henselae
(Bo)B. bronchiseptica
(Bp)B. parapertussis
(Bt)B. thetaiotaomicron
(Bu)B. thuringiensis
(Bv)B. vulgatus
(C)H. cytomegalovirus
(Ca)C. acetobutylicum
(Cc)C. crescentus
(Cd)C. diphtheriae
(Cf)C. difficile
(Cg)C. glutamicum
(Ch)C. hutchinsonii
(Cl)C. saccharolyticus
(Cm)C. thermocellum
(Cp)C. perfringens
(Cr)C. metallidurans/Ralstonia metallidurans
(Cs)C. psychrerythraea
(Ct)C. tepidum
(Cv)C. violaceum
(D)S. pyogenes
(Dh)D. hafniense
(Do)D. rerio
(Dr)D. radiodurans
(Dv)D. vulgaris
(E)E. coli
(Ec)E. chrysanthemi
(Ef)E. faecalis
(Er)E. rectale
(Es)M. smithii
(Eu)E. cuniculi
(Ew)E. carotovora
(F)D. melanogaster
(G)A. fulgidus
(Gg)G. gallus
(Gm)G. metallireducens
(Gs)G. sulfurreducens
(Gt)G. thermodenitrificans
(H)H. sapiens
(Hd)H. ducreyi
(Hm)H. marismortui
(Hs)H. sp.
(I)H. influenzae
(Il)I. loihiensis
(J)P. horikoshi
(K)L. lactis
(Km)K. marxianus
(Kp)K. pneumoniae
(L)B. melitensis
(La)L. acidophilus
(Lb)L. brevis
(Lc)L. casei
(Ld)L. delbrueckii
(Lg)L. pneumophila
(Lj)L. johnsonii
(Lk)L. innocua
(Lm)L. monocytogenes
(Lp)L. plantarum
(Ls)L. salivarius
(M)N. meningitidis
(Ma)M. mazei
(Mb)M. bovis
(Mc)M. capsulatus str. Bath
(Md)M. sedula
(Me)M. extorquens
(Mf)M. barkeri fusaro
(Mg)M. genitalium
(Mh)M. herpesvirus
(Mi)M. echinospora
(Mj)M. jannaschii
(Ml)M. loti
(Mm)M. musculus
(Mn)M. vannielii
(Mo)M. aeolicus
(Mp)M. pneumoniae
(Mq)M. aquaeolei
(Mr)M. maripaludis
(Ms)M. smegmatis
(Mt)M. thermoacetica
(Mu)M. labreanum
(Mv)M. acetivorans
(My)M. flagellatus
(N)F. nucleatum
(Na)N. aromaticivorans
(Ne)N. europaea
(Ng)N. gonorrhoeae
(Nm)N. multiformis
(Np)N. pharaonis
(Nq)N. equitans
(Ns)N. sp. PCC 7120
(O)Other
(Oa)C. aerofaciens
(Oe)C. eutactus
(Oo)O. oeni
(P)H. pylori
(Pa)P. aeruginosa
(Pc)P. acnes
(Pd)P. display
(Pf)P. furiosus
(Pg)P. gingivalis
(Ph)P. patens
(Pl)P. fluorescens
(Pm)P. micros/Micromonas micros
(Pp)P. putida
(Ps)P. syringae
(Pt)P. pentosaceus
(Pv)P. vulgaris
(Q)A. aeolicus
(Ql)C. leptum
(Qp)C. spiroforme
(Qr)C. ramosum
(Qs)C. scindens
(R)S. coelicolor
(Rd)R. denitrificans
(Re)R. etli
(Rh)R. sphaeroides
(Ri)R. vitis
(Rl)R. leguminosarum
(Rm)S. meliloti
(Rn)R. norvegicus
(Ro)R. sp. RHA1
(Rp)R. palustris
(Rr)R. rubrum
(Rs)R. solanacearum
(Rv)R. virus
(S)B. subtilis
(Sa)S. agalactiae
(Sb)S. pombe
(Sc)S. choleraesuis
(Sd)S. boydii
(Se)S. epidermidis
(Sf)S. flexneri
(Sg)S. sp. PCC 6803
(Sh)S. haemolyticus
(Si)S. pomeroyi
(Sl)S. enterica
(Sm)S. mutans
(Sn)S. elongatus
(So)S. oneidensis
(Sp)S. pneumoniae
(Sr)S. ruber DSM 13855
(Ss)S. solfataricus
(St)S. typhimurium
(Su)S. thermophilus
(Sv)S. avermitilis
(Sx)S. suis
(Sy)S. saprophyticus
(Sz)S. globisporus
(T)M. thermautotrophicus
(Ta)T. acidophilum
(Tc)B. caccae
(Td)T. denticola
(Te)T. elongatus
(Tf)T. fusca
(Tm)S. marinus
(Tv)T. volcanium
(U)T. thermophilus
(Uc)B. ambifaria/Burkholderia cepacia
(Ud)E. dolichum
(Uf)E. formicigeneran/Dorea formicigenerans
(Ug)R. gnavus
(Uh)B. thailandensis
(Uo)R. obeum
(Up)C. parapsilosis
(Ut)R. torques
(Uu)U. parvum
(Uv)E. ventriosum
(V)T. maritima
(Vc)V. cholerae
(Ve)V. eiseniae
(Vf)V. fischeri
(Vh)B. pectinophilus
(Vl)B. linens
(Vm)P. merdae
(Vp)V. parahaemolyticus
(Vs)B. stercoris
(Vu)B. uniformis
(Vv)B. ovatus
(W)C. elegans
(Wr)
(Ws)W. succinogenes
(X)A. pernix
(Xa)X. axonopodis
(Xc)X. campestris
(Xf)X. fastidiosa
(Xo)X. oryzae pv. oryzae KACC10331
(Y)S. cerevisiae
(Ye)Y. enterocolitica
(Yp)Y. pseudotuberculosis
(Z)S. aureus
(Zr)Z. rouxii
n target id length mass PDB match status properties domains BLAST searches      
1 HR4694F
 84   aa 9.5 kD 100% id over 100% len NMR and X-Ray structures Ubiquitin
 (Spine)   (PDB)      
2 HR3646E
 111 aa 12.4 kD 100% id over 100% len NMR and X-Ray structures (Spine)   (PDB)      
3 HR4435B
 53   aa 6.1 kD 100% id over 100% len NMR and X-Ray structures (Spine)   (PDB)      
4 HR5546A
 133 aa 14.6 kD 100% id over 100% len NMR and X-Ray structures (Spine)   (PDB)      
5 HR4527E
 75   aa 8.3 kD 100% id over 100% len NMR and X-Ray structures (Spine)   (PDB)      
6 HR3102A
 76   aa 8.5 kD 100% id over 100% len NMR and X-Ray structures (Spine)   (PDB)      
7 HR4626B
 202 aa 23.4 kD 100% id over 100% len X-Ray structure OB fold
 (Spine)   (PDB)      
8 HC3
 406 aa 46.7 kD 81% id over 100% len X-Ray structure (Spine)   (PDB)      
9 HR3050E
 142 aa 16.1 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
10 HR6307A
 16   aa 1.7 kD 100% id over 100% len X-Ray structure TMH   (Spine)   (PDB)      
11 HR5562A
 202 aa 23.4 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
12 HC02
 149 aa 17.9 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
13 HR5550A
 143 aa 16.3 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
14 HR5538B
 124 aa 14.0 kD 100% id over 96% len X-Ray structure (Spine)   (PDB)      
15 HR2978
 186 aa 21.0 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
16 HR3486E
 84   aa 10.1 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
17 HR3066A
 185 aa 21.8 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
18 HR5563A
 208 aa 24.1 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
19 HR4604D
 81   aa 9.6 kD 100% id over 100% len X-Ray structure ZN   (Spine)   (PDB)      
20 HR5531C
 178 aa 21.5 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
21 HR4626A
 227 aa 25.8 kD 99% id over 87% len X-Ray structure OB fold
 (Spine)   (PDB)      
22 HR5571A
 252 aa 28.9 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
23 HR2930
 175 aa 20.1 kD 100% id over 87% len X-Ray structure (Spine)   (PDB)      
24 HR4796B
 99   aa 11.9 kD 100% id over 100% len X-Ray structure (Spine)   (PDB)      
25 HR3057H
 55   aa 6.2 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
26 HT2B
 51   aa 5.9 kD 99% id over 100% len NMR structure ZN   (Spine)   (PDB)      
27 HR4495E
 137 aa 15.1 kD 85% id over 100% len NMR structure (Spine)   (PDB)      
28 HR2869A
 154 aa 17.9 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
29 HR8174A
 57   aa 6.5 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
30 HR5554A
 165 aa 18.8 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
31 HR4653B
 78   aa 9.0 kD 99% id over 97% len NMR structure (Spine)   (PDB)      
32 HR3158
 498 aa 55.4 kD 100% id over 21% len NMR structure (Spine)   (PDB)      
33 HR4710B
 77   aa 8.4 kD 99% id over 100% len NMR structure ZN   (Spine)   (PDB)      
34 HR6275
 70   aa 7.5 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
35 HR3443B
 343 aa 37.9 kD 100% id over 30% len NMR structure (Spine)   (PDB)      
36 HR4714B
 101 aa 12.0 kD 100% id over 86% len NMR structure (Spine)   (PDB)      
37 HR4436B
 63   aa 7.2 kD 100% id over 94% len NMR structure ZN   (Spine)   (PDB)      
38 HR3111A
 55   aa 6.1 kD 100% id over 86% len NMR structure (Spine)   (PDB)      
39 HT98A
 92   aa 10.2 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
40 HT6304A
 73   aa 8.0 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
41 HR3461D
 105 aa 12.3 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
42 HR532
 118 aa 13.5 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
43 HR4394C
 134 aa 15.8 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
44 HR5524A
 103 aa 11.5 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
45 HR6186A
 74   aa 8.0 kD 100% id over 99% len NMR structure (Spine)   (PDB)      
46 HR5531E
 91   aa 10.1 kD 100% id over 94% len NMR structure (Spine)   (PDB)      
47 HR4547E
 54   aa 5.8 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
48 HR4395C
 128 aa 15.0 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
49 HT1
 101 aa 11.6 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
50 HR8546A
 121 aa 13.3 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
51 HR4403E
 110 aa 12.6 kD 45% id over 93% len NMR structure (Spine)   (PDB)      
52 HR4411B
 91   aa 10.7 kD 90% id over 97% len NMR structure LIP   (Spine)   (PDB)      
53 HR5460A
 151 aa 18.0 kD 100% id over 90% len NMR structure (Spine)   (PDB)      
54 HR8011A
 67   aa 7.7 kD 91% id over 95% len NMR structure (Spine)   (PDB)      
55 HT99A
 70   aa 8.0 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
56 HR6470A
 92   aa 10.7 kD 99% id over 65% len NMR structure (Spine)   (PDB)      
57 HR4730A
 97   aa 10.7 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
58 HR3662A
 163 aa 18.5 kD 81% id over 51% len NMR structure (Spine)   (PDB)      
59 HR6430A
 132 aa 14.3 kD 100% id over 67% len NMR structure (Spine)   (PDB)      
60 HR4479E
 67   aa 7.6 kD 99% id over 92% len NMR structure (Spine)   (PDB)      
61 HR5537A
 125 aa 13.3 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
62 HT2A
 137 aa 15.9 kD 99% id over 100% len NMR structure ZN   (Spine)   (PDB)      
63 HT2C
 75   aa 8.6 kD 100% id over 100% len NMR structure ZN   (Spine)   (PDB)      
64 HR7057A
 87   aa 9.7 kD 44% id over 45% len NMR structure (Spine)   (PDB)      
65 HR4660B
 163 aa 19.3 kD 100% id over 100% len NMR structure (Spine)   (PDB)      
66 HR3023C
 117 aa 13.2 kD 100% id over 98% len NMR structure (Spine)   (PDB)      
67 HR3557M
 117 aa 12.6 kD 35% id over 79% len good HSQC collected and crystal hits (Spine)   (PDB)      
68 HR3356F
 133 aa 14.7 kD 32% id over 94% len good HSQC collected and crystal hits (Spine)   (PDB)      
69 HR3504C
 149 aa 17.7 kD 46% id over 94% len good HSQC collected and crystal hits ZN   (Spine)   (PDB)      
70 HR6401A
 65   aa 7.2 kD 71% id over 93% len good HSQC collected and crystal hits ZN   (Spine)   (PDB)      
71 HR4724B
 164 aa 17.9 kD 100% id over 79% len good HSQC collected and crystal hits (Spine)   (PDB)      
72 HR6354E
 205 aa 22.5 kD 63% id over 99% len good HSQC collected and crystal hits (Spine)   (PDB)      
73 HR8208A
 57   aa 6.8 kD 92% id over 100% len good HSQC collected and crystal hits LIP   (Spine)   (PDB)      
74 HR3175
 165 aa 17.8 kD 100% id over 100% len good HSQC collected and crystal hits (Spine)   (PDB)      
75 HR3520O
 81   aa 9.5 kD 66% id over 97% len good HSQC collected and crystal hits (Spine)   (PDB)      
76 HR5569C
 191 aa 22.2 kD 30% id over 92% len good HSQC collected and crystal hits (Spine)   (PDB)      
77 HR3646G
 76   aa 8.6 kD 98% id over 94% len good HSQC collected and crystal hits (Spine)   (PDB)      
78 HR3050A
 165 aa 18.7 kD 99% id over 87% len good HSQC collected and crystal hits (Spine)   (PDB)      
79 HR4403C
 149 aa 17.1 kD 44% id over 72% len good HSQC collected and crystal hits (Spine)   (PDB)      
80 HR8578D
 96   aa 10.3 kD 34% id over 84% len good HSQC collected and crystal hits (Spine)   (PDB)      
81 HR6956C
 86   aa 10.1 kD 69% id over 89% len good HSQC collected and crystal hits ZN   (Spine)   (PDB)      
82 HR8613A
 50   aa 6.0 kD 70% id over 100% len good HSQC collected and crystal hits (Spine)   (PDB)      
83 HR4479F
 159 aa 17.4 kD 100% id over 89% len HSQC collected and crystal hits (Spine)   (PDB)      
84 HR4755B
 128 aa 14.8 kD 48% id over 29% len HSQC collected and crystal hits (Spine)   (PDB)      
85 HR3159
 160 aa 17.8 kD 56% id over 100% len HSQC collected and crystal hits (Spine)   (PDB)      
86 HR3159A
 151 aa 16.8 kD 57% id over 98% len HSQC collected and crystal hits (Spine)   (PDB)      
87 HR3166A
 222 aa 25.0 kD 29% id over 75% len HSQC collected and crystal hits (Spine)   (PDB)      
88 HR3381E
 195 aa 22.0 kD 70% id over 71% len HSQC collected and crystal hits (Spine)   (PDB)      
89 HR5546B
 95   aa 11.3 kD 100% id over 83% len HSQC collected and crystal hits (Spine)   (PDB)      
90 HR3490F
 155 aa 18.0 kD 44% id over 24% len HSQC collected and crystal hits (Spine)   (PDB)      
91 HT107B
 82   aa 9.5 kD no match HSQC collected and crystal hits Ubiquitin
 (Spine)   (PDB)      
92 HR3159B
 146 aa 16.3 kD 57% id over 100% len HSQC collected and crystal hits (Spine)   (PDB)      
93 HR4479D
 147 aa 16.3 kD 100% id over 96% len HSQC collected and crystal hits (Spine)   (PDB)      
94 HR5528A
 112 aa 12.3 kD 98% id over 86% len HSQC collected and crystal hits (Spine)   (PDB)      
95 HR3530D
 104 aa 12.2 kD 28% id over 59% len HSQC collected and crystal hits (Spine)   (PDB)      
96 HR5543A
 129 aa 15.3 kD 33% id over 100% len HSQC collected and crystal hits (Spine)   (PDB)      
97 HR4515B
 102 aa 11.5 kD 59% id over 84% len HSQC collected and crystal hits (Spine)   (PDB)      
98 HR4599B
 66   aa 7.6 kD 47% id over 85% len HSQC collected and crystal hits (Spine)   (PDB)      
99 HR3135
 159 aa 17.1 kD 100% id over 100% len HSQC collected and crystal hits (Spine)   (PDB)      
100 HR3356E
 160 aa 17.7 kD 32% id over 79% len HSQC collected and crystal hits (Spine)   (PDB)      

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